› 1hhh

X-ray diffraction
3Å resolution

THE ANTIGENIC IDENTITY OF PEPTIDE(SLASH)MHC COMPLEXES: A COMPARISON OF THE CONFORMATION OF FIVE PEPTIDES PRESENTED BY HLA-A2

Released:
DOI: 10.2210/pdb1hhh/pdb
PDB entry 1hhh coloured by chain, front view.
PDB entry 1hhh coloured by chain, side view.
PDB entry 1hhh coloured by chain, top view.
Source organisms:
Primary publication:
The antigenic identity of peptide-MHC complexes: a comparison of the conformations of five viral peptides presented by HLA-A2.
Madden DR, Garboczi DN, Wiley DC
Cell 75 693-708 (1993)
PMID: 7694806

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-137662 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
HLA class I histocompatibility antigen, A alpha chain Chain: A
Molecule details ›
Chain: A
Length: 275 amino acids
Theoretical weight: 31.85 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P04439 (Residues: 25-299; Coverage: 81%)
Gene names: HLA-A, HLAA
Sequence domains:
Structure domains:
Beta-2-microglobulin Chain: B
Molecule details ›
Chain: B
Length: 100 amino acids
Theoretical weight: 11.88 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P61769 (Residues: 21-119; Coverage: 100%)
Gene names: B2M, CDABP0092, HDCMA22P
Sequence domains: Immunoglobulin C1-set domain
Structure domains: Immunoglobulins
Capsid protein Chain: C
Molecule details ›
Chain: C
Length: 10 amino acids
Theoretical weight: 1.16 KDa
Source organism: Hepatitis B virus
Expression system: Not provided
UniProt:
  • Canonical: P12901 (Residues: 18-27; Coverage: 6%)
Gene name: C

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P212121
Unit cell:
a: 60.63Å b: 81.24Å c: 94.76Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.286 0.286 not available
Expression systems:
  • Escherichia coli
  • Not provided

Quick links

Citations

83 review citations

MHC ligands and peptide motifs: first listing.
Rammensee et al. (1995)
82 more

13 mentions without citation

Insufficiently dehydrated hydrogen bonds as determinants of protein interactions.
Fernández et al. (2003)
12 more