1oc0

X-ray diffraction
2.28Å resolution

plasminogen activator inhibitor-1 complex with somatomedin B domain of vitronectin

Released:
Source organism: Homo sapiens

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-137318 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Plasminogen activator inhibitor 1 Chain: A
Molecule details ›
Chain: A
Length: 379 amino acids
Theoretical weight: 42.78 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P05121 (Residues: 24-402; Coverage: 100%)
Gene names: PAI1, PLANH1, SERPINE1
Sequence domains: Serpin (serine protease inhibitor)
Structure domains:
Somatomedin-B Chain: B
Molecule details ›
Chain: B
Length: 51 amino acids
Theoretical weight: 5.82 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P04004 (Residues: 20-70; Coverage: 11%)
Gene name: VTN
Sequence domains: Somatomedin B domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P212121
Unit cell:
a: 47.501Å b: 90.087Å c: 100.163Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.198 0.196 0.252
Expression systems:
  • Escherichia coli BL21(DE3)
  • Escherichia coli