1yhn

X-ray diffraction
3Å resolution

Structure basis of RILP recruitment by Rab7

Released:
Source organism: Homo sapiens
Primary publication:
Structural basis for recruitment of RILP by small GTPase Rab7.
EMBO J 24 1491-501 (2005)
PMID: 15933719

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero tetramer (preferred)
PDBe Complex ID:
PDB-CPX-156308 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Ras-related protein Rab-7a Chain: A
Molecule details ›
Chain: A
Length: 207 amino acids
Theoretical weight: 23.5 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P51149 (Residues: 1-207; Coverage: 100%)
Gene names: RAB7, RAB7A
Sequence domains: Ras family
Structure domains: P-loop containing nucleotide triphosphate hydrolases
Rab-interacting lysosomal protein Chain: B
Molecule details ›
Chain: B
Length: 65 amino acids
Theoretical weight: 7.79 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q96NA2 (Residues: 244-308; Coverage: 16%)
Gene names: PP10141, RILP
Sequence domains: Rab interacting lysosomal protein
Structure domains: YejL-like

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE BW7A
Spacegroup: P6522
Unit cell:
a: 93.134Å b: 93.134Å c: 132.826Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.268 0.268 0.278
Expression system: Escherichia coli