› 1yse

Solution NMR

Solution structure of the MAR-binding domain of SATB1

Released:
DOI: 10.2210/pdb1yse/pdb
PDB entry 1yse coloured by chain, ensemble of 20 models, front view.
PDB entry 1yse coloured by chain, ensemble of 20 models, side view.
PDB entry 1yse coloured by chain, ensemble of 20 models, top view.
Source organism: Homo sapiens
Primary publication:
Solution structure and DNA-binding mode of the matrix attachment region-binding domain of the transcription factor SATB1 that regulates the T-cell maturation.
Yamaguchi H, Tateno M, Yamasaki K
J Biol Chem 281 5319-27 (2006)
PMID: 16371359

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-169634 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DNA-binding protein SATB1 Chain: A
Molecule details ›
Chain: A
Length: 141 amino acids
Theoretical weight: 15.81 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q01826 (Residues: 353-490; Coverage: 18%)
Gene name: SATB1
Sequence domains: CUT domain
Structure domains: lambda repressor-like DNA-binding domains

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Escherichia coli BL21(DE3)

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Citations

1 review citation

SATB1-mediated chromatin landscape in T cells.
Zelenka et al. (2020)
18 other articles

2 mentions without citation

Structural basis for recognition of the matrix attachment region of DNA by transcription factor SATB1.
Yamasaki et al. (2007)
1 more