› 1yzm

X-ray diffraction
1.5Å resolution

Structure of Rabenosyn (458-503), Rab4 binding domain

Released:
DOI: 10.2210/pdb1yzm/pdb
PDB entry 1yzm coloured by chain, front view.
PDB entry 1yzm coloured by chain, side view.
PDB entry 1yzm coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Structural basis of family-wide Rab GTPase recognition by rabenosyn-5.
Eathiraj S, Pan X, Ritacco C, Lambright DG
Nature 436 415-9 (2005)
PMID: 16034420

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-190519 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rabenosyn-5 Chain: A
Molecule details ›
Chain: A
Length: 51 amino acids
Theoretical weight: 5.9 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9H1K0 (Residues: 458-503; Coverage: 6%)
Gene names: RBSN, ZFYVE20
Sequence domains: Rabenosyn Rab binding domain
Structure domains: Rabenosyn, Rab binding domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RUH3R
Spacegroup: P212121
Unit cell:
a: 26.366Å b: 42.236Å c: 43.059Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.208 0.195 0.205
Expression system: Escherichia coli

Quick links

Citations

31 review citations

Rab GTPases as coordinators of vesicle traffic.
Stenmark H. (2009)
30 more

13 mentions without citation

Protein-protein docking benchmark version 3.0.
Hwang et al. (2008)
12 more