1zw7

Solution NMR

Elimination of the C-cap in Ubiquitin Structure, Dynamics and Thermodynamic Consequences

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-143464 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Ubiquitin Chain: A
Molecule details ›
Chain: A
Length: 82 amino acids
Theoretical weight: 9.18 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P0CG63 (Residues: 229-304; Coverage: 20%)
Gene names: SCD2, UBI4, YLL039C
Sequence domains: Ubiquitin family
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: Structure calculations were performed using CNS version 1.0 on an SGI platform. The refinement protocol for annealing involved torsion angle heating (100 K, 1000 steps) followed by cooling in torsion (100 K, 5000 steps) and cartesian space (1000 K, 10,000 steps).
Expression system: Escherichia coli