› 1a1d

Solution NMR

YEAST RNA POLYMERASE SUBUNIT RPB8, NMR, MINIMIZED AVERAGE STRUCTURE, ALPHA CARBONS ONLY

Released:
DOI: 10.2210/pdb1a1d/pdb
PDB entry 1a1d coloured by chain, front view.
PDB entry 1a1d coloured by chain, side view.
PDB entry 1a1d coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Eukaryotic RNA polymerase subunit RPB8 is a new relative of the OB family.
Krapp S, Kelly G, Reischl J, Weinzierl RO, Matthews S
Nat Struct Biol 5 110-4 (1998)
PMID: 9461075

Function and Biology Details

Reaction catalysed: 
Nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1)
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-148975 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DNA-directed RNA polymerases I, II, and III subunit RPABC3 Chain: A
Molecule details ›
Chain: A
Length: 146 amino acids
Theoretical weight: 16.53 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P20436 (Residues: 1-146; Coverage: 100%)
Gene names: RPB8, YOR224C, YOR50-14
Sequence domains: RNA polymerase Rpb8

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Escherichia coli BL21

Quick links

Citations

3 review citations

Structure and function of archaeal RNA polymerases.
Werner F. (2007)
2 more

36 mentions without citation

Structural insights into the mechanisms of antibody-mediated neutralization of flavivirus infection: implications for vaccine development.
Pierson et al. (2008)
35 more