› 1b54

X-ray diffraction
2.1Å resolution

CRYSTAL STRUCTURE OF A YEAST HYPOTHETICAL PROTEIN-A STRUCTURE FROM BNL'S HUMAN PROTEOME PROJECT

Released:
DOI: 10.2210/pdb1b54/pdb
PDB entry 1b54 coloured by chain, front view.
PDB entry 1b54 coloured by chain, side view.
PDB entry 1b54 coloured by chain, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Structure of a yeast hypothetical protein selected by a structural genomics approach.
Eswaramoorthy S, Gerchman S, Graziano V, Kycia H, Studier FW, Swaminathan S
Acta Crystallogr D Biol Crystallogr 59 127-35 (2003)
PMID: 12499548

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153574 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Pyridoxal phosphate homeostasis protein Chain: A
Molecule details ›
Chain: A
Length: 257 amino acids
Theoretical weight: 29.16 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P38197 (Residues: 1-257; Coverage: 100%)
Gene names: YBL036C, YBL0413
Sequence domains: Alanine racemase, N-terminal domain
Structure domains: Alanine racemase

Ligands and Environments

1 bound ligand:
Ligand PLP 1 x PLP
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X8C
Spacegroup: P212121
Unit cell:
a: 48.58Å b: 65.71Å c: 91.94Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.235 0.235 0.303
Expression system: Escherichia coli

Quick links

Citations

4 review citations

A genomic overview of pyridoxal-phosphate-dependent enzymes.
Percudani et al. (2003)
3 more

12 mentions without citation

Structural genomics: a pipeline for providing structures for the biologist.
Chance et al. (2002)
11 more