› 1bb8

Solution NMR

N-TERMINAL DNA BINDING DOMAIN FROM TN916 INTEGRASE, NMR, 25 STRUCTURES

Released:
DOI: 10.2210/pdb1bb8/pdb
PDB entry 1bb8 coloured by chain, ensemble of 25 models, front view.
PDB entry 1bb8 coloured by chain, ensemble of 25 models, side view.
PDB entry 1bb8 coloured by chain, ensemble of 25 models, top view.
Source organism: Enterococcus faecalis
Primary publication:
Site-specific DNA binding using a variation of the double stranded RNA binding motif.
Connolly KM, Wojciak JM, Clubb RT
Nat Struct Biol 5 546-50 (1998)
PMID: 9665166

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-149817 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Transposase from transposon Tn916 Chain: A
Molecule details ›
Chain: A
Length: 71 amino acids
Theoretical weight: 8.46 KDa
Source organism: Enterococcus faecalis
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P22886 (Residues: 3-73; Coverage: 18%)
Gene name: Int-Tn
Sequence domains: DNA binding domain of tn916 integrase
Structure domains: Classic Zinc Finger

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: DISTANCE GEOMETRY AND SIMULATED ANNEALING
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

4 review citations

The double-stranded RNA-binding motif, a versatile macromolecular docking platform.
Chang et al. (2005)
3 more

2 mentions without citation

Discovery of the principal specific transcription factors of Apicomplexa and their implication for the evolution of the AP2-integrase DNA binding domains.
Balaji et al. (2005)
1 more