› 1bde

Solution NMR

HELICAL STRUCTURE OF POLYPEPTIDES FROM THE C-TERMINAL HALF OF HIV-1 VPR, NMR, 20 STRUCTURES

Released:
DOI: 10.2210/pdb1bde/pdb
PDB entry 1bde coloured by chain, ensemble of 20 models, front view.
PDB entry 1bde coloured by chain, ensemble of 20 models, side view.
PDB entry 1bde coloured by chain, ensemble of 20 models, top view.
Source organism: Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Primary publication:
Solution structure of peptides from HIV-1 Vpr protein that cause membrane permeabilization and growth arrest.
Yao S, Torres AM, Azad AA, Macreadie IG, Norton RS
J Pept Sci 4 426-35 (1998)
PMID: 9851370

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domain:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-146251 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Protein Vpr Chain: A
Molecule details ›
Chain: A
Length: 35 amino acids
Theoretical weight: 3.87 KDa
Source organism: Human immunodeficiency virus type 1 (NEW YORK-5 ISOLATE)
Expression system: Not provided
UniProt:
  • Canonical: P12520 (Residues: 49-82; Coverage: 35%)
Gene name: vpr
Sequence domains: VPR/VPX protein

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: DISTANCE GEOMETRY AND SIMULATED ANNEALING
Expression system: Not provided

Quick links

Citations

7 citation in other articles

UBA domains mediate protein-protein interactions between two DNA damage-inducible proteins.
Bertolaet et al. (2001)
6 more