› 1bk8

Solution NMR

DETERMINATION OF THE THREE-DIMENSIONAL SOLUTION STRUCTURE OF AESCULUS HIPPOCASTANUM ANTIMICROBIAL PROTEIN 1 (AH-AMP1) BY 1H NMR, 25 STRUCTURES

Released:
DOI: 10.2210/pdb1bk8/pdb
PDB entry 1bk8 coloured by chain, ensemble of 25 models, front view.
PDB entry 1bk8 coloured by chain, ensemble of 25 models, side view.
PDB entry 1bk8 coloured by chain, ensemble of 25 models, top view.
Source organism: Aesculus hippocastanum
Primary publication:
The three-dimensional solution structure of Aesculus hippocastanum antimicrobial protein 1 determined by 1H nuclear magnetic resonance.
Fant F, Vranken WF, Borremans FA
Proteins 37 388-403 (1999)
PMID: 10591099

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-181692 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Defensin-like protein 1 Chain: A
Molecule details ›
Chain: A
Length: 50 amino acids
Theoretical weight: 5.87 KDa
Source organism: Aesculus hippocastanum
UniProt:
  • Canonical: Q7M1F3 (Residues: 1-50; Coverage: 100%)
Sequence domains: Gamma-thionin family
Structure domains: Knottin, scorpion toxin-like

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: DISTANCE GEOMETRY AND SIMULATED ANNEALING

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Citations

7 review citations

The relationship between peptide structure and antibacterial activity.
Powers et al. (2003)
6 more

11 mentions without citation

Chemical shift prediction for protein structure calculation and quality assessment using an optimally parameterized force field.
Nielsen et al. (2012)
10 more