› 1deh

X-ray diffraction
2.2Å resolution

CRYSTALLIZATION OF HUMAN BETA1 ALCOHOL DEHYDROGENASE (15 MG/ML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+ AND 1 MM 4-IODOPYRAZOLE AT 25 OC, 13% (W/V) PEG 8000

Released:
DOI: 10.2210/pdb1deh/pdb
PDB entry 1deh coloured by chain, front view.
PDB entry 1deh coloured by chain, side view.
PDB entry 1deh coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
X-ray structure of human beta3beta3 alcohol dehydrogenase. The contribution of ionic interactions to coenzyme binding.
Davis GJ, Bosron WF, Stone CL, Owusu-Dekyi K, Hurley TD
J Biol Chem 271 17057-61 (1996)
PMID: 8663387

Function and Biology Details

Reaction catalysed: 
All-trans-retinol-[cellular-retinol-binding-protein] + NAD(+) = all-trans-retinal-[cellular-retinol-binding-protein] + NADH
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132402 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
All-trans-retinol dehydrogenase [NAD(+)] ADH1B Chains: A, B
Molecule details ›
Chains: A, B
Length: 374 amino acids
Theoretical weight: 39.77 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P00325 (Residues: 2-375; Coverage: 100%)
Gene names: ADH1B, ADH2
Sequence domains:
Structure domains:

Ligands and Environments


Cofactor: Ligand NAD 2 x NAD
3 bound ligands:
Ligand ZN 4 x ZN
Ligand PYZ 2 x PYZ
Ligand CL 1 x CL
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P1
Unit cell:
a: 54.04Å b: 44.54Å c: 93.32Å
α: 92.56° β: 103.26° γ: 68.84°
R-values:
R R work R free
0.18 0.18 0.261
Expression system: Escherichia coli

Quick links

Citations

3 review citations

A review of alcohol clearance in humans.
Lands WE. (1998)
2 more

4 mentions without citation

Targeting Metalloenzymes for Therapeutic Intervention.
Chen et al. (2019)
3 more