› 1dnv

X-ray diffraction
3.6Å resolution

PARVOVIRUS (DENSOVIRUS) FROM GALLERIA MELLONELLA

Released:
DOI: 10.2210/pdb1dnv/pdb
Model geometry
Fit model/data
PDB entry 1dnv coloured by chain, front view.
PDB entry 1dnv coloured by chain, side view.
PDB entry 1dnv coloured by chain, top view.
Source organism: Galleria mellonella densovirus
Primary publication:
The structure of an insect parvovirus (Galleria mellonella densovirus) at 3.7 A resolution.
Simpson AA, Chipman PR, Baker TS, Tijssen P, Rossmann MG
Structure 6 1355-67 (1998)
PMID: 9817847

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo 60-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-187439 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein VP1 Chain: A
Molecule details ›
Chain: A
Length: 437 amino acids
Theoretical weight: 47.43 KDa
Source organism: Galleria mellonella densovirus
UniProt:
  • Canonical: Q90125 (Residues: 375-811; Coverage: 54%)
Gene name: VP
Sequence domains: Capsid protein VP4

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

wwPDB Validation report is not available for this entry.
X-ray source: CHESS BEAMLINE F1
Spacegroup: P41212
Unit cell:
a: 264.44Å b: 264.44Å c: 683.45Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.271 0.271 not available

Quick links

Citations

8 review citations

Adding the third dimension to virus life cycles: three-dimensional reconstruction of icosahedral viruses from cryo-electron micrographs.
Baker et al. (1999)
7 more

13 mentions without citation

Twenty-Five Years of Structural Parvovirology.
Mietzsch et al. (2019)
12 more