› 1e8i

X-ray diffraction
1.95Å resolution

HUMAN CD69 - TETRAGONAL FORM

Released:
DOI: 10.2210/pdb1e8i/pdb
PDB entry 1e8i coloured by chain, front view.
PDB entry 1e8i coloured by chain, side view.
PDB entry 1e8i coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Crystal structure of the C-type lectin-like domain from the human hematopoietic cell receptor CD69.
Llera AS, Viedma F, Sánchez-Madrid F, Tormo J
J Biol Chem 276 7312-9 (2001)
PMID: 11036086

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-170445 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Early activation antigen CD69 Chains: A, B
Molecule details ›
Chains: A, B
Length: 118 amino acids
Theoretical weight: 13.81 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q07108 (Residues: 82-199; Coverage: 59%)
Gene names: CD69, CLEC2C
Sequence domains: Lectin C-type domain
Structure domains: Mannose-Binding Protein A, subunit A

Ligands and Environments

1 bound ligand:
Ligand SO4 1 x SO4
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID14-3
Spacegroup: P43212
Unit cell:
a: 69.629Å b: 69.629Å c: 118.588Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.248 0.248 0.27
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

9 review citations

The C-type lectin-like domain superfamily.
Zelensky et al. (2005)
8 more

4 mentions without citation

The structure of the poxvirus A33 protein reveals a dimer of unique C-type lectin-like domains.
Su et al. (2010)
3 more