1ijk

X-ray diffraction
2.6Å resolution

The von Willebrand Factor mutant (I546V) A1 domain-botrocetin Complex

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero trimer (preferred)
PDBe Complex ID:
PDB-CPX-137566 (preferred)
Entry contents:
3 distinct polypeptide molecules
Macromolecules (3 distinct):
von Willebrand factor Chain: A
Molecule details ›
Chain: A
Length: 202 amino acids
Theoretical weight: 23.13 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P04275 (Residues: 1263-1464; Coverage: 7%)
Gene names: F8VWF, VWF
Sequence domains: von Willebrand factor type A domain
Structure domains: von Willebrand factor, type A domain
Snaclec botrocetin subunit alpha Chain: B
Molecule details ›
Chain: B
Length: 133 amino acids
Theoretical weight: 15.23 KDa
Source organism: Bothrops jararaca
UniProt:
  • Canonical: P22029 (Residues: 1-133; Coverage: 100%)
Sequence domains: Lectin C-type domain
Structure domains: Mannose-Binding Protein A, subunit A
Snaclec botrocetin subunit beta Chain: C
Molecule details ›
Chain: C
Length: 125 amino acids
Theoretical weight: 15.05 KDa
Source organism: Bothrops jararaca
UniProt:
  • Canonical: P22030 (Residues: 1-125; Coverage: 100%)
Sequence domains: Lectin C-type domain
Structure domains: Mannose-Binding Protein A, subunit A

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL11-1
Spacegroup: P21
Unit cell:
a: 65.664Å b: 66.672Å c: 69.402Å
α: 90° β: 105.41° γ: 90°
R-values:
R R work R free
0.219 0.219 0.279
Expression system: Escherichia coli