1jat

X-ray diffraction
1.6Å resolution

Mms2/Ubc13 Ubiquitin Conjugating Enzyme Complex

Released:

Function and Biology Details

Reaction catalysed:
S-ubiquitinyl-[E1 ubiquitin-activating enzyme]-L-cysteine + [E2 ubiquitin-conjugating enzyme]-L-cysteine = [E1 ubiquitin-activating enzyme]-L-cysteine + S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine
Biochemical function:

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-156557 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Ubiquitin-conjugating enzyme E2 13 Chain: A
Molecule details ›
Chain: A
Length: 155 amino acids
Theoretical weight: 17.57 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P52490 (Residues: 2-153; Coverage: 99%)
Gene names: UBC13, YD6652.04, YDR092W
Sequence domains: Ubiquitin-conjugating enzyme
Structure domains: Ubiquitin Conjugating Enzyme
Ubiquitin-conjugating enzyme variant MMS2 Chain: B
Molecule details ›
Chain: B
Length: 138 amino acids
Theoretical weight: 15.7 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P53152 (Residues: 1-137; Coverage: 100%)
Gene names: MMS2, YGL087C
Sequence domains: Ubiquitin-conjugating enzyme
Structure domains: Ubiquitin Conjugating Enzyme

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X4A
Spacegroup: P21
Unit cell:
a: 43.158Å b: 63.797Å c: 53.152Å
α: 90° β: 105.83° γ: 90°
R-values:
R R work R free
0.203 0.203 0.239
Expression system: Escherichia coli