› 1kq3

X-ray diffraction
1.5Å resolution

Function and Biology Details

Reaction catalysed: 
Glycerol + NAD(+) = glycerone + NADH
Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo octamer
Assembly name:
PDBe Complex ID:
PDB-CPX-194530 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Glycerol dehydrogenase Chain: A
Molecule details ›
Chain: A
Length: 376 amino acids
Theoretical weight: 41.2 KDa
Source organism: Thermotoga maritima
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9WYQ4 (Residues: 1-364; Coverage: 100%)
Gene names: TM_0423, gldA
Sequence domains: Iron-containing alcohol dehydrogenase
Structure domains:

Ligands and Environments

3 bound ligands:
Ligand ZN 1 x ZN
Ligand CL 1 x CL
Ligand TRS 1 x TRS
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: I422
Unit cell:
a: 105.73Å b: 105.73Å c: 135.79Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.173 0.173 0.189
Expression system: Escherichia coli

Quick links

Citations

28 review citations

Protein production and purification.
Structural Genomics et al. (2008)
27 more

12 mentions without citation

The Pfam protein families database.
Finn et al. (2010)
11 more