› 1njk

X-ray diffraction
1.9Å resolution

Crystal Structure of YbaW Probable Thioesterase from Escherichia coli

Released:
DOI: 10.2210/pdb1njk/pdb
PDB entry 1njk coloured by chain, front view.
PDB entry 1njk coloured by chain, side view.
PDB entry 1njk coloured by chain, top view.
Source organism: Escherichia coli
Entry authors: Kim Y, Joachimiak A, Edwards A, Xu X, Savchenko A, Midwest Center for Structural Genomics (MCSG)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160192 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Long-chain acyl-CoA thioesterase FadM Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 156 amino acids
Theoretical weight: 18.01 KDa
Source organism: Escherichia coli
Expression system: Escherichia coli
UniProt:
  • Canonical: P77712 (Residues: 1-132; Coverage: 100%)
Gene names: JW0433, b0443, fadM, tesC, ybaW
Sequence domains: Thioesterase superfamily
Structure domains: Hotdog Thioesterase

Ligands and Environments

1 bound ligand:
Ligand IOD 4 x IOD
1 modified residue:
Ligand MSE 12 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 19-ID
Spacegroup: P31
Unit cell:
a: 90.134Å b: 90.134Å c: 83.373Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.217 0.214 0.24
Expression system: Escherichia coli

Quick links