› 1p5y

X-ray diffraction
3.2Å resolution

The structures of host range controlling regions of the capsids of canine and feline parvoviruses and mutants

Released:
DOI: 10.2210/pdb1p5y/pdb
PDB entry 1p5y coloured by chain, front view.
PDB entry 1p5y coloured by chain, side view.
PDB entry 1p5y coloured by chain, top view.
Source organism: Canine parvovirus
Primary publication:
Structures of host range-controlling regions of the capsids of canine and feline parvoviruses and mutants.
Govindasamy L, Hueffer K, Parrish CR, Agbandje-McKenna M
J Virol 77 12211-21 (2003)
PMID: 14581558

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo 60-mer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-148071 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Capsid protein VP1 Chain: A
Molecule details ›
Chain: A
Length: 548 amino acids
Theoretical weight: 61.56 KDa
Source organism: Canine parvovirus
Expression system: Not provided
UniProt:
  • Canonical: P17455 (Residues: 180-727; Coverage: 75%)
Sequence domains: Parvovirus coat protein VP2
Structure domains: Parvovirus coat protein VP1/VP2

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: CHESS BEAMLINE F1
Spacegroup: C2
Unit cell:
a: 440.45Å b: 246.81Å c: 443.65Å
α: 90° β: 93.54° γ: 90°
R-values:
R R work R free
0.252 0.252 0.253
Expression system: Not provided

Quick links

Citations

6 review citations

Cross-species virus transmission and the emergence of new epidemic diseases.
Parrish et al. (2008)
5 more

3 mentions without citation

Twenty-Five Years of Structural Parvovirology.
Mietzsch et al. (2019)
2 more