› 1pdj

Electron Microscopy
12Å resolution

Fitting of gp27 into cryoEM reconstruction of bacteriophage T4 baseplate

Released:
DOI: 10.2210/pdb1pdj/pdb
PDB entry 1pdj coloured by chain, front view.
PDB entry 1pdj coloured by chain, side view.
PDB entry 1pdj coloured by chain, top view.
Source organism: Escherichia virus T4
Primary publication:
Three-dimensional structure of bacteriophage T4 baseplate.
Kostyuchenko VA, Leiman PG, Chipman PR, Kanamaru S, van Raaij MJ, Arisaka F, Mesyanzhinov VV, Rossmann MG
Nat Struct Biol 10 688-93 (2003)
PMID: 12923574
Related structures: EMD-1048

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-147887 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Baseplate central spike complex protein gp27 Chains: D, E, F
Molecule details ›
Chains: D, E, F
Length: 391 amino acids
Theoretical weight: 44.43 KDa
Source organism: Escherichia virus T4
UniProt:
  • Canonical: P17172 (Residues: 1-391; Coverage: 100%)
Gene name: 27
Sequence domains:

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Resolution: 12Å
Relevant EMDB volumes: EMD-1048

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Citations

25 review citations

A view to a kill: the bacterial type VI secretion system.
Ho et al. (2014)
24 more