Function and Biology

Fitting of gp27 into cryoEM reconstruction of bacteriophage T4 baseplate

Source organism: Escherichia virus T4
Biochemical function: protein binding
Biological process: viral tail assembly
Cellular component: virus tail, baseplate

GO terms

Biochemical function:
Biological process:
Cellular component:

Sequence families

Pfam Protein families (Pfam)
PF09096
Domain description: Baseplate structural protein, domain 2
Occurring in:
  1. Baseplate central spike complex protein gp27
The deposited structure of PDB entry 1pdj contains 3 copies of Pfam domain PF09096 (Baseplate structural protein, domain 2) in Baseplate central spike complex protein gp27. Showing 1 copy in chain A [auth D].

PF09097
Domain description: Baseplate structural protein, domain 1
Occurring in:
  1. Baseplate central spike complex protein gp27
The deposited structure of PDB entry 1pdj contains 3 copies of Pfam domain PF09097 (Baseplate structural protein, domain 1) in Baseplate central spike complex protein gp27. Showing 1 copy in chain A [auth D].

InterPro InterPro annotations
IPR043084
Domain description: Gp27, baseplate hub, domain 4
Occurring in:
  1. Baseplate central spike complex protein gp27
IPR043083
Domain description: Gp27, baseplate hub, domain 3
Occurring in:
  1. Baseplate central spike complex protein gp27
IPR015180
Domain description: Bacteriophage T4, Gp27, baseplate hub, C-terminal
Occurring in:
  1. Baseplate central spike complex protein gp27
IPR043085
Domain description: Gp27, baseplate hub, domain 2
Occurring in:
  1. Baseplate central spike complex protein gp27
IPR015181
Domain description: Bacteriophage T4, Gp27, baseplate hub, N-terminal
Occurring in:
  1. Baseplate central spike complex protein gp27
IPR043504
Domain description: Peptidase S1, PA clan, chymotrypsin-like fold
Occurring in:
  1. Baseplate central spike complex protein gp27

Structure domain

SCOP SCOP annotation
103676
Class: Low resolution protein structures
Fold: Bacteriophage T4 3D cryo-EM reconstruction
Superfamily: Bacteriophage T4 3D cryo-EM reconstruction
Occurring in:
  1. Baseplate central spike complex protein gp27
The deposited structure of PDB entry 1pdj contains 3 copies of SCOP domain 103676 (Bacteriophage T4 3D cryo-EM reconstruction) in Baseplate central spike complex protein gp27. Showing 1 copy in chain A [auth D].