› 1q1v

Solution NMR

Structure of the Oncoprotein DEK: a putative DNA-binding Domain Related to the Winged Helix Motif

Released:
DOI: 10.2210/pdb1q1v/pdb
PDB entry 1q1v coloured by chain, ensemble of 10 models, front view.
PDB entry 1q1v coloured by chain, ensemble of 10 models, side view.
PDB entry 1q1v coloured by chain, ensemble of 10 models, top view.
Source organism: Homo sapiens
Primary publication:
Solution NMR structure of the C-terminal domain of the human protein DEK.
Devany M, Kotharu NP, Matsuo H
Protein Sci 13 2252-9 (2004)
PMID: 15238633

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-152989 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Protein DEK Chain: A
Molecule details ›
Chain: A
Length: 70 amino acids
Theoretical weight: 8.27 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P35659 (Residues: 309-375; Coverage: 18%)
Gene name: DEK
Sequence domains: DEK C terminal domain
Structure domains: Homeodomain-like

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Escherichia coli

Quick links

Citations

2 review citations

Stacking the DEK: from chromatin topology to cancer stem cells.
Privette Vinnedge et al. (2013)
1 more

5 mentions without citation

Structural assembly of two-domain proteins by rigid-body docking.
Cheng et al. (2008)
4 more