1qmu

X-ray diffraction
2.7Å resolution

Function and Biology Details

Reaction catalysed:
Releases C-terminal Arg and Lys from polypeptides.
Biochemical function:
Biological process:
Cellular component:

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-160769 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecules (3 distinct):
Carboxypeptidase D Chain: A
Molecule details ›
Chain: A
Length: 380 amino acids
Theoretical weight: 43.34 KDa
Source organism: Lophonetta specularioides
Expression system: Komagataella pastoris
UniProt:
  • Canonical: P83852 (Residues: 1-380; Coverage: 100%)
Gene name: CPD
Sequence domains:
Structure domains:

Ligands and Environments

Carbohydrate polymer : NEW Components: NAG, MAN
Carbohydrate polymer : NEW Components: NAG
2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X11
Spacegroup: P213
Unit cell:
a: 135.54Å b: 135.54Å c: 135.54Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.198 0.198 0.236
Expression system: Komagataella pastoris