› 1ri0

Solution NMR

NMR structure of the N-terminal hath domain of human HDGF

Released:
DOI: 10.2210/pdb1ri0/pdb
PDB entry 1ri0 coloured by chain, ensemble of 20 models, front view.
PDB entry 1ri0 coloured by chain, ensemble of 20 models, side view.
PDB entry 1ri0 coloured by chain, ensemble of 20 models, top view.
Source organism: Homo sapiens
Primary publication:
Solution structure and heparin interaction of human hepatoma-derived growth factor.
Sue SC, Chen JY, Lee SC, Wu WG, Huang TH
J Mol Biol 343 1365-77 (2004)
PMID: 15491618

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-156431 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Hepatoma-derived growth factor Chain: A
Molecule details ›
Chain: A
Length: 110 amino acids
Theoretical weight: 12.8 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P51858 (Residues: 1-100; Coverage: 42%)
Gene names: HDGF, HMG1L2
Sequence domains: PWWP domain
Structure domains: SH3 type barrels.

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing, molecular dynamics
Expression system: Escherichia coli BL21(DE3)

Quick links

Citations

4 review citations

Structure and function of the nucleosome-binding PWWP domain.
Qin et al. (2014)
3 more

2 mentions without citation

PWWP domains and their modes of sensing DNA and histone methylated lysines.
Rona et al. (2016)
1 more