› 1vcx

Neutron Diffraction
1.5Å resolution

Neutron Crystal Structure of the Wild Type Rubredoxin from Pyrococcus Furiosus at 1.5A Resolution

Released:
DOI: 10.2210/pdb1vcx/pdb
PDB entry 1vcx coloured by chain, front view.
PDB entry 1vcx coloured by chain, side view.
PDB entry 1vcx coloured by chain, top view.
Source organism: Pyrococcus furiosus
Primary publication:
Neutron crystallographic study on rubredoxin from Pyrococcus furiosus by BIX-3, a single-crystal diffractometer for biomacromolecules.
Kurihara K, Tanaka I, Chatake T, Adams MW, Jenney FE, Moiseeva N, Bau R, Niimura N
Proc Natl Acad Sci U S A 101 11215-20 (2004)
PMID: 15272083

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-150200 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Rubredoxin Chain: A
Molecule details ›
Chain: A
Length: 53 amino acids
Theoretical weight: 5.9 KDa
Source organism: Pyrococcus furiosus
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P24297 (Residues: 2-54; Coverage: 98%)
Gene names: PF1282, rub
Sequence domains: Rubredoxin
Structure domains: Rubrerythrin, domain 2

Ligands and Environments

2 bound ligands:
Ligand FE 1 x FE
Ligand DOD 37 x DOD
No modified residues

Experiments and Validation Details

Spacegroup: P212121
Unit cell:
a: 34.32Å b: 35.31Å c: 44.23Å α: 90° β: 90° γ: 90°
R-values:
R R work R free 0.186 0.186 0.217
Expression system: Escherichia coli BL21(DE3)

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Citations

18 citation in other articles

Complicated water orientations in the minor groove of the B-DNA decamer d(CCATTAATGG)2 observed by neutron diffraction measurements.
Arai et al. (2005)
17 more

15 mentions without citation

Neutron crystallography: opportunities, challenges, and limitations.
Blakeley et al. (2008)
14 more