› 216d

X-ray diffraction
1.73Å resolution

CRYSTAL STRUCTURES OF THE B-FORM DNA-RNA CHIMER (5'-D(*IP*)-R(*CP*)-D(*IP*CP*IP*CP*IP*C)-3') COMPLEXED WITH DISTAMYCIN

Released:
DOI: 10.2210/pdb216d/pdb
PDB entry 216d coloured by chain, front view.
PDB entry 216d coloured by chain, side view.
PDB entry 216d coloured by chain, top view.
Source organism: Synthetic construct
Primary publication:
Crystal structures of B-form DNA-RNA chimers complexed with distamycin.
Chen X, Ramakrishnan B, Sundaralingam M
Nat Struct Biol 2 733-5 (1995)
PMID: 7552741

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-113092 (preferred)
Entry contents:
1 distinct DNA/RNA hybrid molecule
Macromolecule:
DNA/RNA (5'-D(*IP*)-R(*CP*)-D(*IP*CP*IP*CP*IP*C)-3') Chain: A
Molecule details ›
Chain: A
Length: 8 nucleotides
Theoretical weight: 2.38 KDa
Source organism: Synthetic construct
Expression system: Not provided

Ligands and Environments

2 bound ligands:
Ligand DMY 1 x DMY
Ligand MG 1 x MG
No modified residues

Experiments and Validation Details

Entry percentile scores
Spacegroup: P4122
Unit cell:
a: 27.92Å b: 27.92Å c: 57.7Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.152 0.152 not available
Expression system: Not provided

Quick links

Citations

5 review citations

Making the bend: DNA tertiary structure and protein-DNA interactions.
Harteis et al. (2014)
4 more

1 mention without citation

Nanoscale Patterning of Carbon Nanotubes: Techniques, Applications, and Future.
Corletto et al. (2020)