2b5n

X-ray diffraction
2.8Å resolution

Crystal Structure of the DDB1 BPB Domain

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
PDBe Complex ID:
PDB-CPX-172469 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DNA damage-binding protein 1 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 323 amino acids
Theoretical weight: 35.71 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q16531 (Residues: 390-709; Coverage: 28%)
Gene names: DDB1, XAP1
Sequence domains: Mono-functional DNA-alkylating methyl methanesulfonate N-term
Structure domains: YVTN repeat-like/Quinoprotein amine dehydrogenase

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 5.0.2
Spacegroup: P21
Unit cell:
a: 101.543Å b: 73.747Å c: 136.778Å
α: 90° β: 111.728° γ: 90°
R-values:
R R work R free
0.242 0.236 0.296
Expression system: Escherichia coli