› 2b6h

X-ray diffraction
1.76Å resolution

Structure of human ADP-ribosylation factor 5

Released:
DOI: 10.2210/pdb2b6h/pdb
PDB entry 2b6h coloured by chain, front view.
PDB entry 2b6h coloured by chain, side view.
PDB entry 2b6h coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Tempel W, Atanassova A, Sundarajan E, Dimov S, Shehab I, Lew J, Arrowsmith C, Edwards A, Sundstrom M, Weigelt J, Bochkarev A, Park H, Structural Genomics Consortium (SGC)

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo dimer
Assembly name:
PDBe Complex ID:
PDB-CPX-160807 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
ADP-ribosylation factor 5 Chain: A
Molecule details ›
Chain: A
Length: 192 amino acids
Theoretical weight: 21.93 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P84085 (Residues: 8-180; Coverage: 96%)
Gene name: ARF5
Sequence domains: ADP-ribosylation factor family
Structure domains: P-loop containing nucleotide triphosphate hydrolases

Ligands and Environments

4 bound ligands:
Ligand CL 1 x CL
Ligand SO4 1 x SO4
Ligand GDP 1 x GDP
Ligand UNX 6 x UNX
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU FR-E
Spacegroup: C2221
Unit cell:
a: 64.996Å b: 81.64Å c: 84.399Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.202 0.2 0.236
Expression system: Escherichia coli BL21(DE3)

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