2g3q

Solution NMR

Solution Structure of Ede1 UBA-ubiquitin complex

Released:
Source organism: Saccharomyces cerevisiae
Primary publication:
Structural basis for monoubiquitin recognition by the Ede1 UBA domain.
J Mol Biol 358 713-24 (2006)
PMID: 16563434

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-143467 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
EH domain-containing and endocytosis protein 1 Chain: A
Molecule details ›
Chain: A
Length: 43 amino acids
Theoretical weight: 4.69 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P34216 (Residues: 1339-1381; Coverage: 3%)
Gene names: BUD15, EDE1, YBL047C, YBL0501, YBL0520
Sequence domains: UBA/TS-N domain
Structure domains: DNA helicase RuvA subunit, C-terminal domain
Ubiquitin Chain: B
Molecule details ›
Chain: B
Length: 76 amino acids
Theoretical weight: 8.57 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P0CG63 (Residues: 305-380; Coverage: 20%)
Gene names: SCD2, UBI4, YLL039C
Sequence domains: Ubiquitin family
Structure domains: Phosphatidylinositol 3-kinase Catalytic Subunit; Chain A, domain 1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: Torsion angle dynamics and simulated annealing
Expression system: Escherichia coli BL21