2gkw

X-ray diffraction
2.7Å resolution

Key contacts promote recongnito of BAFF-R by TRAF3

Released:

Function and Biology Details

Reaction catalysed:
S-ubiquitinyl-[E2 ubiquitin-conjugating enzyme]-L-cysteine + [acceptor protein]-L-lysine = [E2 ubiquitin-conjugating enzyme]-L-cysteine + N(6)-ubiquitinyl-[acceptor protein]-L-lysine
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero hexamer (preferred)
PDBe Complex ID:
PDB-CPX-162717 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
TNF receptor-associated factor 3 Chain: A
Molecule details ›
Chain: A
Length: 192 amino acids
Theoretical weight: 21.83 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q13114 (Residues: 377-568; Coverage: 34%)
Gene names: CAP-1, CRAF1, TRAF3, TRAFAMN
Sequence domains: TRAF/meprin, MATH domain
Structure domains: Apoptosis, Tumor Necrosis Factor Receptor Associated Protein 2; Chain A
Tumor necrosis factor receptor superfamily member 13C Chain: B
Molecule details ›
Chain: B
Length: 24 amino acids
Theoretical weight: 2.41 KDa
Source organism: Homo sapiens
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU RU300
Spacegroup: P321
Unit cell:
a: 83.5Å b: 83.5Å c: 78Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.22 0.22 0.26
Expression systems:
  • Escherichia coli BL21(DE3)
  • Not provided