› 2hv4

Solution NMR

NMR solution structure refinement of yeast iso-1-ferrocytochrome c

Released:
DOI: 10.2210/pdb2hv4/pdb
PDB entry 2hv4 coloured by chain, ensemble of 35 models, front view.
PDB entry 2hv4 coloured by chain, ensemble of 35 models, side view.
PDB entry 2hv4 coloured by chain, ensemble of 35 models, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
Cytochrome c and organic molecules: solution structure of the p-aminophenol adduct.
Assfalg M, Bertini I, Del Conte R, Giachetti A, Turano P
Biochemistry 46 6232-8 (2007)
PMID: 17488096

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-132226 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Cytochrome c isoform 1 Chain: A
Molecule details ›
Chain: A
Length: 108 amino acids
Theoretical weight: 12.07 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Escherichia coli
UniProt:
  • Canonical: P00044 (Residues: 2-109; Coverage: 99%)
Gene names: CYC1, J1653, YJR048W
Sequence domains: Cytochrome c
Structure domains: Cytochrome c-like domain

Ligands and Environments

1 bound ligand:
Ligand HEC 1 x HEC
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing in torsion angle space followed by restrained energy minimization
Expression system: Escherichia coli

Quick links

Citations

4 citation in other articles

Protein camouflage in cytochrome c-calixarene complexes.
McGovern et al. (2012)
3 more

1 mention without citation

Conformer selection and induced fit in flexible backbone protein-protein docking using computational and NMR ensembles.
Chaudhury et al. (2008)