2kri

Solution NMR

Structure of a complex between domain V of beta2-glycoprotein I and the fourth ligand-binding module from LDLR determined with Haddock

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-134044 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Beta-2-glycoprotein 1 Chain: A
Molecule details ›
Chain: A
Length: 85 amino acids
Theoretical weight: 9.58 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P02749 (Residues: 263-345; Coverage: 26%)
Gene names: APOH, B2G1
Sequence domains: Beta-2-glycoprotein-1 fifth domain
Structure domains: Complement Module, domain 1
Low-density lipoprotein receptor Chain: B
Molecule details ›
Chain: B
Length: 40 amino acids
Theoretical weight: 4.4 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P01130 (Residues: 147-186; Coverage: 5%)
Gene name: LDLR
Sequence domains: Low-density lipoprotein receptor domain class A

Ligands and Environments

1 bound ligand:
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing
Expression system: Escherichia coli