› 2m3h

Solution NMR

Structure of Dido PHD domain

Released:
DOI: 10.2210/pdb2m3h/pdb
PDB entry 2m3h coloured by chain, ensemble of 20 models, front view.
PDB entry 2m3h coloured by chain, ensemble of 20 models, side view.
PDB entry 2m3h coloured by chain, ensemble of 20 models, top view.
Source organism: Homo sapiens
Primary publication:
NMR structure note: PHD domain from death inducer obliterator protein and its interaction with H3K4me3.
Santiveri CM, García-Mayoral MF, Pérez-Cañadillas JM, Jiménez MA
J Biomol NMR 56 183-90 (2013)
PMID: 23579637

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-189720 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Death-inducer obliterator 1 Chain: A
Molecule details ›
Chain: A
Length: 61 amino acids
Theoretical weight: 7.05 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9BTC0 (Residues: 265-322; Coverage: 3%)
Gene names: C20orf158, DATF1, DIDO1, KIAA0333
Sequence domains: PHD-finger
Structure domains: Zinc/RING finger domain, C3HC4 (zinc finger)

Ligands and Environments

1 bound ligand:
Ligand ZN 2 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 89%
Refinement method: simulated annealing
Expression system: Escherichia coli

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Citations

6 citation in other articles

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