› 2nat

Solution NMR

Structural insights into interaction of KYE28 and lipopolysachharide

Released:
DOI: 10.2210/pdb2nat/pdb
PDB entry 2nat coloured by chain, ensemble of 20 models, front view.
PDB entry 2nat coloured by chain, ensemble of 20 models, side view.
PDB entry 2nat coloured by chain, ensemble of 20 models, top view.
Source organism: Homo sapiens
Primary publication:
Role of Aromatic Amino Acids in Lipopolysaccharide and Membrane Interactions of Antimicrobial Peptides for Use in Plant Disease Control.
Datta A, Bhattacharyya D, Singh S, Ghosh A, Schmidtchen A, Malmsten M, Bhunia A
J Biol Chem 291 13301-17 (2016)
PMID: 27137928

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-138704 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Heparin cofactor 2 Chain: A
Molecule details ›
Chain: A
Length: 28 amino acids
Theoretical weight: 3.6 KDa
Source organism: Homo sapiens
Expression system: Not provided
UniProt:
  • Canonical: P05546 (Residues: 192-219; Coverage: 6%)
Gene names: HCF2, SERPIND1

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 43%
Refinement method: distance geometry
Expression system: Not provided

Quick links

Citations

3 review citations

Connections Between Amino Acid Metabolisms in Plants: Lysine as an Example.
Yang et al. (2020)
2 more

3 mentions without citation

Cancer Diagnosis through SERS and Other Related Techniques.
Blanco-Formoso et al. (2020)
2 more