2q5y

X-ray diffraction
2.3Å resolution

Crystal Structure of the C-terminal domain of hNup98

Released:
Source organism: Homo sapiens
Primary publication:
Structural constraints on autoprocessing of the human nucleoporin Nup98.
Protein Sci 17 494-505 (2008)
PMID: 18287282

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-156676 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Nuclear pore complex protein Nup98 Chains: A, C
Molecule details ›
Chains: A, C
Length: 152 amino acids
Theoretical weight: 17.2 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P52948 (Residues: 729-880; Coverage: 8%)
Gene names: ADAR2, NUP98
Sequence domains: Nucleoporin autopeptidase
Structure domains: Peptidase S59, nucleoporin
Nuclear pore complex protein Nup96 Chains: B, D
Molecule details ›
Chains: B, D
Length: 7 amino acids
Theoretical weight: 811 Da
Source organism: Homo sapiens
Expression system: Not provided
UniProt:
  • Canonical: P52948 (Residues: 881-887; Coverage: 0%)
Gene names: ADAR2, NUP98

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: NSLS BEAMLINE X12C
Spacegroup: P3121
Unit cell:
a: 90.301Å b: 90.301Å c: 97.648Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.228 0.228 0.26
Expression systems:
  • Escherichia coli BL21(DE3)
  • Not provided