2xjz

X-ray diffraction
2.8Å resolution

Crystal structure of the LMO2:LDB1-LID complex, C2 crystal form

Released:

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-150583 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Rhombotin-2 Chains: A, B, C, D, E
Molecule details ›
Chains: A, B, C, D, E
Length: 131 amino acids
Theoretical weight: 15.39 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: P25791 (Residues: 26-156; Coverage: 83%)
Gene names: LMO2, RBTN2, RBTNL1, RHOM2, TTG2
Sequence domains: LIM domain
Structure domains: Cysteine Rich Protein
LIM domain-binding protein 1 Chains: I, J, K, L, M
Molecule details ›
Chains: I, J, K, L, M
Length: 36 amino acids
Theoretical weight: 3.97 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: Q86U70 (Residues: 334-368; Coverage: 9%)
Gene names: CLIM2, LDB1
Sequence domains: LIM interaction domain (LID)

Ligands and Environments

2 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE BM14
Spacegroup: C2
Unit cell:
a: 179.92Å b: 55.53Å c: 114.71Å
α: 90° β: 90.11° γ: 90°
R-values:
R R work R free
0.229 0.228 0.244
Expression system: Escherichia coli