› 2y0a

X-ray diffraction
2.6Å resolution

Structure of DAPK1 construct residues 1-304

Released:
DOI: 10.2210/pdb2y0a/pdb
PDB entry 2y0a coloured by chain, front view.
PDB entry 2y0a coloured by chain, side view.
PDB entry 2y0a coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Yumerefendi H, Mas PJ, Dordevic N, McCarthy AA, Hart DJ

Function and Biology Details

Reaction catalysed: 
ATP + a protein = ADP + a phosphoprotein
Biochemical function:
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-156788 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Death-associated protein kinase 1 Chain: A
Molecule details ›
Chain: A
Length: 326 amino acids
Theoretical weight: 37.27 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: P53355 (Residues: 2-304; Coverage: 21%)
Gene names: DAPK, DAPK1
Sequence domains: Protein kinase domain
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand MES 1 x MES
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ESRF BEAMLINE ID23-2
Spacegroup: P212121
Unit cell:
a: 50.22Å b: 78.88Å c: 111.47Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.203 0.2 0.259
Expression system: Escherichia coli BL21(DE3)

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