› 2yvi

X-ray diffraction
1.92Å resolution

Crystal structure of a death domain of human ankryn protein

Released:
DOI: 10.2210/pdb2yvi/pdb
PDB entry 2yvi coloured by chain, front view.
PDB entry 2yvi coloured by chain, side view.
PDB entry 2yvi coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Ihsanawati, Bessho Y, Chen L, Liu ZJ, Wang BC, Shirouzu M, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assemblies composition:
monomeric (preferred)
homo dimer
Assembly name:
PDBe Complex ID:
PDB-CPX-147654 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Ankyrin-1 Chain: A
Molecule details ›
Chain: A
Length: 111 amino acids
Theoretical weight: 12.21 KDa
Source organism: Homo sapiens
Expression system: Not provided
UniProt:
  • Canonical: P16157 (Residues: 1393-1497; Coverage: 6%)
Gene names: ANK, ANK1
Sequence domains: Death domain
Structure domains: Death Domain, Fas

Ligands and Environments

1 bound ligand:
Ligand GOL 1 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: APS BEAMLINE 22-BM
Spacegroup: P6122
Unit cell:
a: 46.63Å b: 46.63Å c: 145.15Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.198 0.198 0.217
Expression system: Not provided

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