› 2zot

X-ray diffraction
2.7Å resolution

Crystal structure of human F-spondin reeler domain (fragment 1)

Released:
DOI: 10.2210/pdb2zot/pdb
PDB entry 2zot coloured by chain, front view.
PDB entry 2zot coloured by chain, side view.
PDB entry 2zot coloured by chain, top view.
Source organism: Homo sapiens
Primary publication:
Structure of the F-spondin reeler domain reveals a unique beta-sandwich fold with a deformable disulfide-bonded loop.
Nagae M, Nishikawa K, Yasui N, Yamasaki M, Nogi T, Takagi J
Acta Crystallogr D Biol Crystallogr 64 1138-45 (2008)
PMID: 19020352

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-190771 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Spondin-1 Chains: A, B, C, D
Molecule details ›
Chains: A, B, C, D
Length: 172 amino acids
Theoretical weight: 19.41 KDa
Source organism: Homo sapiens
Expression system: Homo sapiens
UniProt:
  • Canonical: Q9HCB6 (Residues: 29-198; Coverage: 22%)
Gene names: KIAA0762, SPON1, VSGP
Sequence domains: Reeler domain
Structure domains: Reeler domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: PHOTON FACTORY BEAMLINE AR-NW12A, PHOTON FACTORY BEAMLINE BL-17A
Spacegroup: P43
Unit cell:
a: 57.579Å b: 57.579Å c: 190.857Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.246 0.242 0.313
Expression system: Homo sapiens

Quick links

Citations

4 citation in other articles

Novel affinity tag system using structurally defined antibody-tag interaction: application to single-step protein purification.
Nogi et al. (2008)
3 more