2d4m

X-ray diffraction
1.85Å resolution

Function and Biology Details

Reaction catalysed:
dUTP + H(2)O = dUMP + diphosphate
Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
homo trimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-139635 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Nucleocapsid protein-dUTPase Chain: A
Molecule details ›
Chain: A
Length: 152 amino acids
Theoretical weight: 16.17 KDa
Source organism: Mason-Pfizer monkey virus
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: P07570 (Residues: 608-759; Coverage: 17%)
Gene name: gag-pro
Sequence domains: dUTPase
Structure domains: Deoxyuridine 5'-Triphosphate Nucleotidohydrolase; Chain A

Ligands and Environments

No bound ligands
1 modified residue:

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE X13
Spacegroup: P63
Unit cell:
a: 61.191Å b: 61.191Å c: 63.31Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.162 0.16 0.192
Expression system: Escherichia coli BL21