› 2evu

X-ray diffraction
2.3Å resolution

Crystal structure of aquaporin AqpM at 2.3A resolution

Released:
DOI: 10.2210/pdb2evu/pdb
PDB entry 2evu coloured by chain, front view.
PDB entry 2evu coloured by chain, side view.
PDB entry 2evu coloured by chain, top view.
Source organism: Methanothermobacter marburgensis str. Marburg
Primary publication:
Structural basis for conductance by the archaeal aquaporin AqpM at 1.68 A.
Lee JK, Kozono D, Remis J, Kitagawa Y, Agre P, Stroud RM
Proc Natl Acad Sci U S A 102 18932-7 (2005)
PMID: 16361443

Function and Biology Details

Biochemical function:
Biological process:
Cellular component:
Sequence domains:

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-189909 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Aquaporin AqpM Chain: A
Molecule details ›
Chain: A
Length: 246 amino acids
Theoretical weight: 25.36 KDa
Source organism: Methanothermobacter marburgensis str. Marburg
Expression system: Escherichia coli
UniProt:
  • Canonical: Q9C4Z5 (Residues: 1-246; Coverage: 100%)
Gene names: MTBMA_c05510, aqpM
Sequence domains: Major intrinsic protein
Structure domains: Glycerol uptake facilitator protein.

Ligands and Environments

2 bound ligands:
Ligand BOG 2 x BOG
Ligand GOL 6 x GOL
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: ALS BEAMLINE 8.3.1
Spacegroup: I4
Unit cell:
a: 93.887Å b: 93.887Å c: 77.744Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.188 0.188 0.226
Expression system: Escherichia coli

Quick links

Citations

26 review citations

Hydrogen sulfide is a signaling molecule and a cytoprotectant.
Kimura et al. (2012)
25 more

6 mentions without citation

Aquaporin Gating: A New Twist to Unravel Permeation through Water Channels.
Ozu et al. (2022)
5 more