2ez8

X-ray diffraction
1.96Å resolution

Pyruvate oxidase variant F479W in complex with reaction intermediate 2-lactyl-thiamin diphosphate

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
homo tetramer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-153340 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Pyruvate oxidase Chains: A, B
Molecule details ›
Chains: A, B
Length: 603 amino acids
Theoretical weight: 66.25 KDa
Source organism: Lactiplantibacillus plantarum
Expression system: Escherichia coli
UniProt:
  • Canonical: P37063 (Residues: 1-603; Coverage: 100%)
Gene names: lp_3589, pox5
Sequence domains:
Structure domains:

Ligands and Environments


Cofactor: Ligand TDL 2 x TDL

Cofactor: Ligand FAD 2 x FAD
3 bound ligands:
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: EMBL/DESY, HAMBURG BEAMLINE BW7B
Spacegroup: C2221
Unit cell:
a: 118.133Å b: 154.462Å c: 165.656Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.149 0.149 0.172
Expression system: Escherichia coli