› 2glz

X-ray diffraction
1.45Å resolution

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domain:
Structure domain:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-110704 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Formylmethanofuran dehydrogenase subunit E domain-containing protein Chains: A, B
Molecule details ›
Chains: A, B
Length: 153 amino acids
Theoretical weight: 17.58 KDa
Source organism: Desulfitobacterium hafniense DCB-2
Expression system: Escherichia coli
UniProt:
  • Canonical: B8FYU2 (Residues: 1-152; Coverage: 100%)
Gene name: Dhaf_2992
Sequence domains: FmdE, Molybdenum formylmethanofuran dehydrogenase operon
Structure domains: 60s Ribosomal Protein L30; Chain: A;

Ligands and Environments

3 bound ligands:
Ligand ZN 2 x ZN
Ligand NI 2 x NI
Ligand EDO 18 x EDO
1 modified residue:
Ligand MSE 6 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SSRL BEAMLINE BL9-2
Spacegroup: P212121
Unit cell:
a: 46.425Å b: 84.791Å c: 100.711Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.173 0.171 0.198
Expression system: Escherichia coli

Quick links

Citations

4 citation in other articles

Biochemical fossils of the ancient transition from geoenergetics to bioenergetics in prokaryotic one carbon compound metabolism.
Sousa et al. (2014)
3 more

2 mentions without citation

Structures of three members of Pfam PF02663 (FmdE) implicated in microbial methanogenesis reveal a conserved α+β core domain and an auxiliary C-terminal treble-clef zinc finger.
Axelrod et al. (2010)
1 more