› 2jw6

Solution NMR

Solution structure of the DEAF1 MYND domain

Released:
DOI: 10.2210/pdb2jw6/pdb
PDB entry 2jw6 coloured by chain, ensemble of 10 models, front view.
PDB entry 2jw6 coloured by chain, ensemble of 10 models, side view.
PDB entry 2jw6 coloured by chain, ensemble of 10 models, top view.
Source organism: Homo sapiens
Primary publication:
Retraction notice to "Structure and functional analysis of the MYND domain" [J. Mol. Biol. (2006) 358, 498-508].
Spadaccini R, Perrin H, Bottomley MJ, Ansieau S, Sattler M
J Mol Biol 376 1523 (2008)
PMID: 18286714

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:
Structure domain:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-130948 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Deformed epidermal autoregulatory factor 1 homolog Chain: A
Molecule details ›
Chain: A
Length: 52 amino acids
Theoretical weight: 5.88 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli
UniProt:
  • Canonical: O75398 (Residues: 496-544; Coverage: 9%)
Gene names: DEAF1, SPN, ZMYND5
Sequence domains: MYND finger
Structure domains: Helix Hairpins

Ligands and Environments

1 bound ligand:
Ligand ZN 2 x ZN
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: simulated annealing, molecular dynamics
Expression system: Escherichia coli

Quick links

Citations

1 review citation

Zinc finger structure determination by NMR: Why zinc fingers can be a handful.
Neuhaus D. (2022)
1 other article

2 mentions without citation

Classification of the treble clef zinc finger: noteworthy lessons for structure and function evolution.
Kaur et al. (2016)
1 more