› 2m24

Solution NMR

NMR solution structure of the d3'-hairpin including the exon binding site 1 (EBS1) of the group II intron Sc.ai5gamma

Released:
DOI: 10.2210/pdb2m24/pdb
PDB entry 2m24 coloured by chain, ensemble of 20 models, front view.
PDB entry 2m24 coloured by chain, ensemble of 20 models, side view.
PDB entry 2m24 coloured by chain, ensemble of 20 models, top view.
Source organism: Saccharomyces cerevisiae
Primary publication:
NMR structure of the 5' splice site in the group IIB intron Sc.ai5γ--conformational requirements for exon-intron recognition.
Kruschel D, Skilandat M, Sigel RK
RNA 20 295-307 (2014)
PMID: 24448450

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-196488 (preferred)
Entry contents:
1 distinct RNA molecule
Macromolecule:
RNA (29-MER) Chain: A
Molecule details ›
Chain: A
Length: 29 nucleotides
Theoretical weight: 9.3 KDa
Source organism: Saccharomyces cerevisiae
Expression system: Not provided

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Chemical shift assignment: 59%
Refinement method: molecular dynamics, torsion angle dynamics
Expression system: Not provided

Quick links

Citations

2 review citations

NMR Studies of the Structure and Function of the HIV-1 5'-Leader.
Keane et al. (2016)
1 more

2 mentions without citation

NMR structure of the 5' splice site in the group IIB intron Sc.ai5γ--conformational requirements for exon-intron recognition.
Kruschel et al. (2014)
1 more