› 2opc

X-ray diffraction
1.43Å resolution

Structure of Melampsora lini avirulence protein, AvrL567-A

Released:
DOI: 10.2210/pdb2opc/pdb
PDB entry 2opc coloured by chain, front view.
PDB entry 2opc coloured by chain, side view.
PDB entry 2opc coloured by chain, top view.
Source organism: Melampsora lini
Primary publication:
The use of Co2+ for crystallization and structure determination, using a conventional monochromatic X-ray source, of flax rust avirulence protein.
Guncar G, Wang CI, Forwood JK, Teh T, Catanzariti AM, Ellis JG, Dodds PN, Kobe B
Acta Crystallogr Sect F Struct Biol Cryst Commun 63 209-13 (2007)
PMID: 17329816

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-180288 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
AvrL567-A Chain: A
Molecule details ›
Chain: A
Length: 127 amino acids
Theoretical weight: 14.53 KDa
Source organism: Melampsora lini
Expression system: Escherichia coli BL21(DE3)
UniProt:
  • Canonical: Q6R661 (Residues: 24-150; Coverage: 100%)
Gene name: AvrL567-A
Sequence domains: Melampsora lini avirulence protein AvrL567-A
Structure domains: Immunoglobulin-like

Ligands and Environments

2 bound ligands:
Ligand CO 1 x CO
Ligand IMD 1 x IMD
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: RIGAKU
Spacegroup: P212121
Unit cell:
a: 39.818Å b: 52.379Å c: 70.827Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.198 0.197 0.226
Expression system: Escherichia coli BL21(DE3)

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Citations

6 citation in other articles

Crystal structures of flax rust avirulence proteins AvrL567-A and -D reveal details of the structural basis for flax disease resistance specificity.
Wang et al. (2007)
5 more

5 mentions without citation

Effectors of Filamentous Plant Pathogens: Commonalities amid Diversity.
Franceschetti et al. (2017)
4 more