2phg

Solution NMR

Model for VP16 binding to TFIIB

Released:

Function and Biology Details

Structure analysis Details

Assembly composition:
hetero dimer (preferred)
PDBe Complex ID:
PDB-CPX-139062 (preferred)
Entry contents:
2 distinct polypeptide molecules
Macromolecules (2 distinct):
Transcription initiation factor IIB Chain: A
Molecule details ›
Chain: A
Length: 206 amino acids
Theoretical weight: 23 KDa
Source organism: Homo sapiens
Expression system: Escherichia coli BL21
UniProt:
  • Canonical: Q00403 (Residues: 111-316; Coverage: 65%)
Gene names: GTF2B, TF2B, TFIIB
Sequence domains: Transcription factor TFIIB repeat
Structure domains: Cyclin-like
Tegument protein VP16 Chain: B
Molecule details ›
Chain: B
Length: 26 amino acids
Theoretical weight: 2.91 KDa
Source organism: Human alphaherpesvirus 1 strain 17
Expression system: Escherichia coli
UniProt:
  • Canonical: P06492 (Residues: 465-490; Coverage: 5%)
Gene name: UL48
Sequence domains: Herpes simplex virus virion protein 16 C terminal

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: The model was calculated using HADDOCK
Expression systems:
  • Escherichia coli BL21
  • Escherichia coli