› 2ysr

Solution NMR

Solution structure of the DEP domain from human DEP domain-containing protein 1

Released:
DOI: 10.2210/pdb2ysr/pdb
PDB entry 2ysr coloured by chain, ensemble of 20 models, front view.
PDB entry 2ysr coloured by chain, ensemble of 20 models, side view.
PDB entry 2ysr coloured by chain, ensemble of 20 models, top view.
Source organism: Homo sapiens
Entry authors: Zhang HP, Hayahsi F, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
  • not assigned
Biological process:
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-178319 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DEP domain-containing protein 1A Chain: A
Molecule details ›
Chain: A
Length: 105 amino acids
Theoretical weight: 12.18 KDa
Source organism: Homo sapiens
Expression system: Not provided
UniProt:
  • Canonical: Q5TB30 (Residues: 11-108; Coverage: 12%)
Gene names: DEPDC1, DEPDC1A
Sequence domains: Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP)
Structure domains: Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain

Ligands and Environments

No bound ligands
No modified residues

Experiments and Validation Details

Entry percentile scores
Refinement method: torsion angle dynamics
Expression system: Not provided

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