› 2yv8

X-ray diffraction
1.92Å resolution

Crystal structure of N-terminal domain of human galectin-8

Released:
DOI: 10.2210/pdb2yv8/pdb
PDB entry 2yv8 coloured by chain, front view.
PDB entry 2yv8 coloured by chain, side view.
PDB entry 2yv8 coloured by chain, top view.
Source organism: Homo sapiens
Entry authors: Kishishita S, Nishino A, Murayama K, Terada T, Shirouzu M, Yokoyama S, RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
monomeric (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-126160 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
Galectin-8 Chain: A
Molecule details ›
Chain: A
Length: 164 amino acids
Theoretical weight: 18.1 KDa
Source organism: Homo sapiens
Expression system: Not provided
UniProt:
  • Canonical: O00214 (Residues: 1-151; Coverage: 48%)
Gene name: LGALS8
Sequence domains: Galactoside-binding lectin
Structure domains: Jelly Rolls

Ligands and Environments

No bound ligands
1 modified residue:
Ligand MSE 1 x MSE

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL26B2
Spacegroup: P212121
Unit cell:
a: 47.668Å b: 50.012Å c: 69.363Å
α: 90° β: 90° γ: 90°
R-values:
R R work R free
0.186 0.186 0.226
Expression system: Not provided

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