› 2ze3

X-ray diffraction
1.65Å resolution

Crystal Structure of DFA0005 Complexed with alpha-Ketoglutarate: A Novel Member of the ICL/PEPM Superfamily from Alkali-tolerant Deinococcus ficus

Released:
DOI: 10.2210/pdb2ze3/pdb
PDB entry 2ze3 coloured by chain, front view.
PDB entry 2ze3 coloured by chain, side view.
PDB entry 2ze3 coloured by chain, top view.
Source organism: Deinococcus ficus
Primary publication:
Crystal structure of DFA0005 complexed with alpha-ketoglutarate: a novel member of the ICL/PEPM superfamily from alkali-tolerant Deinococcus ficus.
Liao CJ, Chin KH, Lin CH, Tsai PS, Lyu PC, Young CC, Wang AH, Chou SH
Proteins 73 362-71 (2008)
PMID: 18433062

Function and Biology Details

Biochemical function:
Biological process:
  • not assigned
Cellular component:
  • not assigned
Sequence domains:

Structure analysis Details

Assembly composition:
homo dimer (preferred)
Assembly name:
PDBe Complex ID:
PDB-CPX-163377 (preferred)
Entry contents:
1 distinct polypeptide molecule
Macromolecule:
DFA0005 Chain: A
Molecule details ›
Chain: A
Length: 275 amino acids
Theoretical weight: 29.27 KDa
Source organism: Deinococcus ficus
Expression system: Escherichia coli
Structure domains:

Ligands and Environments

1 bound ligand:
Ligand AKG 1 x AKG
No modified residues

Experiments and Validation Details

Entry percentile scores
X-ray source: SPRING-8 BEAMLINE BL12B2
Spacegroup: P6322
Unit cell:
a: 108.84Å b: 108.84Å c: 114.118Å
α: 90° β: 90° γ: 120°
R-values:
R R work R free
0.223 0.223 0.234
Expression system: Escherichia coli

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